2020 MBIM Undergraduate Research Symposium

Date: April 30th, 2020

 

 

Date: April 30th, 2020

Live Online Presentations over Zoom.
Keynote Speaker: Dr. Santa Ono, UBC President

 

2020 Awards:

Details Here

Program Package:

Download

 

 

The MBIM URS is an excellent opportunity for undergraduate students to share their research findings, develop communication skills, and network with UBC faculty and peers.

The symposium will include oral and poster presentations featuring the work of our undergraduate students done in research laboratories (MICB 448/449/Co-op), and some of our experiential learning courses (MICB 406/421/447).

Prizes for the top presentations will be awarded.

Please direct any questions about the symposium to Dr. David Oliver (dcoliver@mail.ubc.ca).

WELCOME

It is with great pleasure we welcome you to the 2020 Microbiology and Immunology Undergraduate Research Symposium (MBIM URS)! After the success of the last two years, we are delighted to share with you our students’ hard work at the third annual MBIM  URS. Although an in-person event is not possible this year due to the COVID-19 pandemic, we believe a live online event is an excellent way to ensure that students have a chance to showcase their work. The organizing committee has been working diligently to make this year’s event a possibility and to set a precedent for the first ever online undergraduate symposium, and we are excited to be able to share this experience with you all.

This year’s symposium will explore the diverse and evolving topics under clinical microbiology, antibiotic resistance, gut microbiome and biofilms, and mechanisms of adaptation. These  sessions will provide students with the opportunity to broaden their knowledge and participate in scientific discourse. With the times that we are in, we believe it is more important than ever to continue pursuing advancements in science. 

This symposium would not have been possible without our hardworking undergraduate student and faculty organizing committee. We appreciate Dr. David Oliver for his leadership and support in the planning of this event. A special thank you to Dr. Parvin Bolourani for providing guidance and support, Dr. Marcia Graves and Dr. Evelyn Sun for providing insight at meetings, Eric Lee for his IT expertise, and Craig Kornak for helping us reach out to students. We are honoured to have Dr. Santa Ono as our keynote speaker, and we would like to thank Dr. Michael Murphy and Dr. Julian Davies for their welcome addresses. Lastly, we would like to thank all of the symposium participants and attendees for supporting us and seizing this opportunity to advance their scientific experience and education.

We hope you enjoy this symposium and continue supporting undergraduate research in future years. We are looking forward to your virtual presentations!

Yours Remotely,

Mahta Amanian and Wesley Hunt
Co-Chairs | 2020 MBIM Undergraduate Research Symposium

mahta_img wesley_img

Letter from Dr. Michael Murphy

A message from the Department Head

Welcome to the Undergraduate Research Symposium hosted by the Department of Microbiology and Immunology at UBC. The symposium is a showcase of the range and depth of research performed by undergraduate students both in lab courses and in research labs at UBC.

The presentations will demonstrate the high-quality of science performed by the talented students in our programs. Moreover, this student-led and organized symposium is evidence of student curiosity to learn and desire to communicate their science discoveries with each other and the larger UBC community. This drive to connect and work as a community of researchers and learners was not to be suppressed by the inability this year to meet in person. Instead, the first virtual undergraduate research symposium has arrived and will celebrate the many research successes of undergraduates in the Department. I look forward to learning about your research projects and meeting you in person in the future.

Michael Murphy, PhD
Professor and Head
Department of Microbiology & Immunology
University of British Columbia


Program Event Schedule


Thursday April 30th, 2020

Live Online Presentations over Zoom

9:00 - 10:00AM

Opening Remarks & Keynote Speech

  • 9:00 – 9:30 AM: (Opening Remarks: URS Co-Chairs, Dr. Michael Murphy, and Dr. Julian Davies)
  • 9:35 – 9:55 AM: Keynote Speech by Dr. Santa Ono
  • 9:55 – 10:00 AM: Transition to Presentations (URS Co-Chairs)

10:00 - 11:25AM

Session 1: Clinical Microbiology

  • Oral Presentation:
  • Comparisons of clinical isolates of Pseudomonas aeruginosa (LESB58 and LESB65) and establishing a chronic In-Vitro lung infection model Pavneet Kalsi, Ka-Yee Grace Choi, Robert EW Hancock
  • Poster Presentation:
    A systematic review and meta-analysis of patients' knowledge of anti-thrombotics Elaine Hu, William Shen, Jinny Choi, Amelia Choy
  • Poster Presentation:
    The potential role of lactobacillus in treatment of colorectal cancer Tran Hoang Anh (Emma) Le, Tiffany Wai
  • Poster Presentation:
    Optimal treatment for glioblastoma multiforme (GBM) using oncolytic virus Chin-Yueh Cheng, Yucella Liu
  • Poster Presentation:
    TUDCA and Tr1 Cell Supernatants as Potential Therapeutics to Ameliorate Intestinal Epithelial Cell ER Stress Rene Tandun, Enoch Yau, William D. Rees, Theodore S. Steiner

Session 2: Antibiotic Resistance

  • Oral Presentation:
    Generation of an acrAacrE double-knockout in Escherichia coli and its role in kanamycin resistance Ada Ang, Cathy Park, Joshua De Guzman, Shaneel Kumar
  • Poster Presentation:
    Deletions in the capsular polysaccharide wzy Cassette genes differentially affect susceptibility to nitrofurantoin in Escherichia coli K-12 compared to K30 Rehanna Thobani, Gillian Savage, Malhar Shah

11:30AM - 12:00PM

Company Talk

  • 11:30AM - 12:00PM: 10X Genomics
    • Crucial Applications of Single Cell Gene Expression and Immune Profiling for Infectious Disease Research

12:15 - 1:55PM

Session 3: Gut Microbiome and Biofilms

  • Poster Presentation:
    Increasing concentrations of commercial stevia inhibit growth and biofilm formation of Escherichia coli MG1655 Al-Rohet Hossain, Derek Lee, Thomas Soroski, Boyan K. Tsankov
  • Poster Presentation:
    Biofilm production in Escherichia coli K30 with group 1 capsular gene wza and wza-wzb-wzc deletions is not correlated with erythromycin resistance phenotypes in liquid media Cynthia James, Christine Kim, Catherine Pan, Douglas Zhong
  • Poster Presentation:
    Intestinal pH modulates the growth, stress, and virulence of murine pathogen C.rodentium Laurel M. Neufeld, Sarah E. Woodward, B. Brett Finlay
  • Poster Presentation:
    Resistance to sucralose in Escherichia coli is not conferred by mutations in the quinolone resistance determining regions of gyrA Solana Cheng, Sara S. Dalkilic

Session 4: Mechanisms of Adaptation

  • Oral Presentation:
    Trehalose does not appear to protect Escherichia coli from SDS-EDTA-induced outer membrane stress Mackenzie W. Gutierrez, Laurel M. Neufeld, Xin Wei, Yi Han Yin
  • Poster Presentation:
    The rate of T7 phage-mediated lysis of Escherichia coli growing in exponential phase is not affected by deletion of rpoS Jingyao Zhu, Cai Lan Jennifer Huang, Kamand Doraki, Bryan Lee
  • Oral Presentation:
    Limiting phosphorus in M9 minimal media results in impaired growth and decreased glucose content in Escherichia coli MG1655 Niloufar Benam, Sahi Hajirawala, Jasper Hoi Chun Luong, Charlene Yang
  • Oral Presentation:
    Bacterial genome-wide association analysis hints towards the involvement of potential operons in determining transient versus chronic infection among Burkholderia multivorans Kendrew SK. Wong, James EA. Zlosnik, Mark A. Chilvers

2:00 - 2:15PM

Thank You & Explanation of Awards

May 1st - Announce awards on this page

Note: Schedule is currently tentative and subject to change


Keynote Lecture


Santa J. Ono

Speech: Curiosity and a Desire to Help Others: My Career Path in Immunology

Professor Santa J. Ono is the President and Vice-Chancellor of the University of British Columbia, a global centre for research and teaching with 64,000 students, 16,500 faculty and staff, and a $2.5 billion operating budget. Prior to his appointment in 2016, he served as president of the University of Cincinnati. Inside Higher Education named him America's most notable university president in 2015. In 2016, the American Council on Education awarded him the Reginald Wilson Diversity Leadership Award.

As a professor of medicine and biology, Professor Ono has worked at Harvard, Johns Hopkins, University College London, and Emory universities. He was also inducted by Johns Hopkins into its Society of Scholars, and is a Fellow of the Royal Society of Chemistry, the Canadian Academy of Health Sciences, the American Association for the Advancement of Science and the National Academy of Inventors, USA.

Professor Ono’s research encompasses the immune system, eye inflammation and age-related macular degeneration.

An avid music lover, Professor Ono studied at the Peabody Conservatory of Music in Baltimore and still finds time to play his cello – even taking to the concert stage to perform on occasion. He is married to Wendy Yip, who trained as an immunologist at McGill and as a lawyer at Boston University. They have two daughters, Juliana and Sarah.

Deadline - April 10th, 2020
MBIM URS uses the guidelines for abstract submission to the American Society for Microbiology Annual General Meeting (summarized in the box below). Please ask your supervisor or course Instructor for advice if you have questions about writing a scientific abstract. Indicate if you would prefer to give an oral presentation (individual or team-based) or poster. A committee will select abstracts for oral presentations. All submissions will be invited to present a poster. Printing services for posters will be provided.

Your abstract may have a maximum limit of 350 words. Authors, groups, institutions, and acknowledgement/references are not counted.

Use 12-point Times New Roman font.

  • Abstracts must be well written and easy to understand.
  • Approval of all co-authors must be obtained before placing their names on an abstract.
  • Abstracts that do not meet the submission requirements will be subject to rejection

Guidelines for Abstracts for Original Research Talks or Posters (MICB 421/447/448/449/co-op):

  • The reason for the study or how the study came about (e.g. hypothesis, discovery or central question) should be clearly stated.
  • Methods must be included.
  • Data must be objectively gathered, analyzed and reported.
  • Data must support the stated conclusion(s).
  • Scientific research presentations will be expected to transparently report a study, including, but not limited to the following:
    1. Experimental design
    2. Methodology
    3. Data collection
    4. Analysis
    5. Interpretation and reporting of results
  • Other key components of scientific rigor that should be included, if applicable, are sample size, randomization, blinding, and replication.

This American Society for Microbiology video provides useful guidance on writing a scientific abstract:
https://www.youtube.com/watch?time_continue=428&v=lLTJ1PKtZwU

Presentation Guidelines: Download

Guidelines for PEARLS (MICB 406) Hot Topic presentations:

  • Structure should follow:
    1. Introduction (background on viruses/viral diseases investigated)
    2. Rational (problem statement - unresolved questions, opportunities, challenges in the fields selected)
    3. Three research questions that will be investigated
    4. Proposed experimental approaches to investigate these questions (technology platforms)
    5. Expected findings from these studies
    6. Overall impact of the proposed work in molecular virology (potential breakthrough and advances in viral infectious diseases)

REX/MURC presentations:

  • Structure should follow:
    1. What is the significance of my study? This can be thought of as the motivation behind the study.
    2. Problem/knowledge gap/hypothesis: What is your study trying to address? What is your main hypothesis?
    3. Methods: How did you try to answer this question/address this problem?
    4. Results: What did you find? NOTE: If you are doing a theoretical project in which you have not obtained results, you can include your expected results in this section. E.g. “We expect to see...”
    5. Implications/discussions: What are the implications of your results?
Undergraduate Planning Committee
  • Mahta Amanian (Co-Chair)
  • Wesley Hunt (Co-Chair)
  • Brooke Cheng
  • Baria Choudry
  • Yasmine Chung
  • Antyrah de Guzman
  • Nikola Deretic
  • Ameena Hashimi
  • Al Rohet Hossain
  • Helen Hsiao
  • Cai Lan Jennifer Huang
  • Cynthia James
  • Shirley Liu
  • Quentin Michalchuk
  • Luiza Pontual
  • Prabhreet Sekhon
  • Egon Shin
  • Hanna Thobani
  • Amelia Tjoa
  • Ashley Tong
  • Jennifer Tong
  • Kelly Wei
  • Andrew Wilson
Faculty & Staff
  • David Oliver, PhD (Co-chair) - Instructor
  • Francois Jean, PhD (Co-chair) - Associate Professor
  • Parvin Bolourani, PhD - Outreach, Alumni Engagement, Postdoctoral Fellows & Project Coordinator
  • Michael Murphy, PhD - Microbiology & Immunology Department Head
  • Marcia Graves, PhD - Instructor
  • Craig Kornak - Undergraduate Administrative Assistant
  • Evelyn Sun, PhD - Postdoctoral Teaching Fellow
  • Eric Lee - IT Support & Web Design